STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBDC1Polysaccharide biosynthesis domain containing 1. (233 aa)    
Predicted Functional Partners:
TTLL12
Tubulin tyrosine ligase like 12.
    
   0.718
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.662
PDCD5
Programmed cell death 5.
   
    0.647
ENSMNEP00000023215
Uncharacterized protein.
   
    0.647
PFDN2
Prefoldin subunit 2.
   
    0.639
NHP2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.567
NOP10
NOP10 ribonucleoprotein.
   
    0.532
ZDHHC24
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.505
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.493
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
   0.463
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.