STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL5LHFPL tetraspan subfamily member 5. (219 aa)    
Predicted Functional Partners:
PCDH15
Protocadherin related 15.
   
 0.920
TMC1
Transmembrane channel-like protein.
   
 
 0.790
TMIE
Transmembrane inner ear.
     
 0.787
CIB2
Calcium and integrin binding family member 2.
   
 
 0.771
TMC2
Transmembrane channel-like protein.
   
 
 0.732
MSRB3
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
      
 0.696
CDHR5
Cadherin related family member 5.
   
 0.693
PJVK
Pejvakin.
      
 0.670
GGT7
Gamma-glutamyltransferase 7.
   
   0.603
USH1C
USH1 protein network component harmonin.
      
 0.602
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.