STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM3Tripartite motif containing 3. (836 aa)    
Predicted Functional Partners:
ACTN4
Actinin alpha 4.
    
 
 0.620
ENSMNEP00000002753
Ubiquitin-like domain-containing protein.
    
  0.543
ENSMNEP00000005796
Ribosomal_S27 domain-containing protein.
    
  0.543
ENSMNEP00000005892
Ubiquitin-like domain-containing protein.
    
  0.543
RPS27A
Ubiquitin-like domain-containing protein.
    
  0.543
ENSMNEP00000035304
Ubiquitin-like domain-containing protein.
    
  0.543
TRIM44
Tripartite motif containing 44.
    
 
 0.539
ENSMNEP00000003800
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.493
UBE2D3
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.493
UBE2D2
Ubiquitin conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.493
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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