STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHF2Pleckstrin homology and FYVE domain containing 2. (249 aa)    
Predicted Functional Partners:
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.547
PLEKHH2
Pleckstrin homology, MyTH4 and FERM domain containing H2.
      
 0.485
MICU1
Mitochondrial calcium uptake 1.
   
 0.435
MICU2
Mitochondrial calcium uptake 2.
   
 0.435
MCU
Mitochondrial calcium uniporter.
     
 0.429
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
     
 0.429
SNX29
Sorting nexin 29.
    
 
 0.411
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.