STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRSF1G-rich RNA sequence binding factor 1. (466 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.679
SLIRP
SRA stem-loop interacting RNA binding protein.
   
 0.643
NCBP2
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
   
 0.565
C10orf55
Chromosome 10 open reading frame 55.
      
 0.558
SCRT1
Scratch family transcriptional repressor 1.
      
 0.555
DUS3L
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
      
 0.554
GPX4
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
      
 0.533
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.530
ENSMNEP00000004915
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals.
      
 0.529
ENSMNEP00000015575
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals.
      
 0.529
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.