STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105481505RRM domain-containing protein. (285 aa)    
Predicted Functional Partners:
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 0.968
ENSMNEP00000010403
Uncharacterized protein.
   
 0.966
SAP18
Sin3A associated protein 18.
   
 0.966
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.956
ENSMNEP00000029986
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.955
EIF4A3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.955
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.948
UPF1
UPF1 RNA helicase and ATPase.
    
 0.947
UPF2
Uncharacterized protein.
    
 0.935
ENSMNEP00000023312
Upf2 domain-containing protein.
    
 0.935
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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