STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLRE1ADNA cross-link repair 1A. (1038 aa)    
Predicted Functional Partners:
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.890
SYMPK
Symplekin.
   
 0.874
XRCC5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
    
 0.864
TERF2
Telomeric repeat binding factor 2.
    
 
 0.854
INTS4
Integrator complex subunit 4.
   
 0.842
FIP1L1
Fip1 domain-containing protein.
    
 0.838
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.814
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.805
FANCM
FA complementation group M.
   
 0.788
WDR82
WD repeat domain 82.
   
 0.775
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.