STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWDEVon Willebrand factor D and EGF domains. (1590 aa)    
Predicted Functional Partners:
CDC27
Cell division cycle 27.
    
 0.708
PKD1L3
Polycystin 1 like 3, transient receptor potential channel interacting.
      
 0.555
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.492
SMPDL3A
Acid sphingomyelinase-like phosphodiesterase.
      
 0.453
ACTN3
Actinin alpha 3 (gene/pseudogene).
    
 0.430
NCSTN
Nicastrin.
    
 0.424
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.415
TTC9C
Tetratricopeptide repeat domain 9C.
   
 0.406
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
Server load: low (28%) [HD]