STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTL1Retrotransposon Gag like 1. (1359 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.913
SGCE
Sarcoglycan epsilon.
   
  
 0.729
CLDN15
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.693
DLK1
Delta like non-canonical Notch ligand 1.
    
 0.652
IL2RB
Interleukin 2 receptor subunit beta.
      
 0.626
BEGAIN
Brain enriched guanylate kinase associated.
   
  
 0.602
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.598
RIN3
Ras and Rab interactor 3.
      
 0.573
TBXT
T-box transcription factor T.
   
  
 0.567
ENAH
ENAH actin regulator.
      
 0.542
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
Server load: high (98%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.