Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COL2A1 | HOXD8 | ENSMNEP00000020889 | ENSMNEP00000007128 | Collagen type II alpha 1 chain. | Homeobox D8. | 0.700 |
CUX2 | HOXC9 | ENSMNEP00000032698 | ENSMNEP00000026097 | Cut like homeobox 2. | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | 0.586 |
CUX2 | HOXD8 | ENSMNEP00000032698 | ENSMNEP00000007128 | Cut like homeobox 2. | Homeobox D8. | 0.594 |
CUX2 | LIM2 | ENSMNEP00000032698 | ENSMNEP00000040880 | Cut like homeobox 2. | Lens fiber membrane intrinsic protein; Present in the thicker 16-17 nm junctions of mammalian lens fiber cells, where it may contribute to cell junctional organization. Acts as a receptor for calmodulin. May play an important role in both lens development and cataractogenesis; Belongs to the PMP-22/EMP/MP20 family. | 0.579 |
CUX2 | MEIS2 | ENSMNEP00000032698 | ENSMNEP00000009857 | Cut like homeobox 2. | Meis homeobox 2. | 0.473 |
CUX2 | MKX | ENSMNEP00000032698 | ENSMNEP00000032977 | Cut like homeobox 2. | Mohawk homeobox. | 0.586 |
HOXC9 | CUX2 | ENSMNEP00000026097 | ENSMNEP00000032698 | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | Cut like homeobox 2. | 0.586 |
HOXC9 | HOXD8 | ENSMNEP00000026097 | ENSMNEP00000007128 | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | Homeobox D8. | 0.545 |
HOXC9 | LIM2 | ENSMNEP00000026097 | ENSMNEP00000040880 | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | Lens fiber membrane intrinsic protein; Present in the thicker 16-17 nm junctions of mammalian lens fiber cells, where it may contribute to cell junctional organization. Acts as a receptor for calmodulin. May play an important role in both lens development and cataractogenesis; Belongs to the PMP-22/EMP/MP20 family. | 0.576 |
HOXC9 | MEIS2 | ENSMNEP00000026097 | ENSMNEP00000009857 | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | Meis homeobox 2. | 0.523 |
HOXC9 | MKX | ENSMNEP00000026097 | ENSMNEP00000032977 | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | Mohawk homeobox. | 0.623 |
HOXC9 | PBX1 | ENSMNEP00000026097 | ENSMNEP00000025887 | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | PBX homeobox 1. | 0.827 |
HOXC9 | PBX2 | ENSMNEP00000026097 | ENSMNEP00000026802 | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | PBX homeobox 2. | 0.827 |
HOXC9 | PBX3 | ENSMNEP00000026097 | ENSMNEP00000029077 | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | PBX homeobox 3. | 0.827 |
HOXC9 | PBX4 | ENSMNEP00000026097 | ENSMNEP00000037041 | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | PBX homeobox 4. | 0.827 |
HOXD8 | COL2A1 | ENSMNEP00000007128 | ENSMNEP00000020889 | Homeobox D8. | Collagen type II alpha 1 chain. | 0.700 |
HOXD8 | CUX2 | ENSMNEP00000007128 | ENSMNEP00000032698 | Homeobox D8. | Cut like homeobox 2. | 0.594 |
HOXD8 | HOXC9 | ENSMNEP00000007128 | ENSMNEP00000026097 | Homeobox D8. | Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. | 0.545 |
HOXD8 | LIM2 | ENSMNEP00000007128 | ENSMNEP00000040880 | Homeobox D8. | Lens fiber membrane intrinsic protein; Present in the thicker 16-17 nm junctions of mammalian lens fiber cells, where it may contribute to cell junctional organization. Acts as a receptor for calmodulin. May play an important role in both lens development and cataractogenesis; Belongs to the PMP-22/EMP/MP20 family. | 0.576 |
HOXD8 | MEIS2 | ENSMNEP00000007128 | ENSMNEP00000009857 | Homeobox D8. | Meis homeobox 2. | 0.626 |
page 1 of 4