STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX56DEAD-box helicase 56. (546 aa)    
Predicted Functional Partners:
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.984
RPF2
Ribosome production factor 2 homolog.
   
 
 0.974
ENSMNEP00000016992
Uncharacterized protein.
   
 
 0.974
EBNA1BP2
EBNA1 binding protein 2.
   
 0.967
RBM28
RNA binding motif protein 28.
   
 
 0.966
DDX24
DEAD-box helicase 24.
  
 
0.958
NOP58
NOP58 ribonucleoprotein.
  
 
 0.954
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.951
WDR74
WD repeat domain 74.
   
 
 0.950
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 0.947
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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