FABP1 protein (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FABP1

Fatty acid binding protein 1. (127 aa)

Predicted Functional Partners:

FABP2

0.928

APOC3

0.905

APOH

0.874

APOB

0.874

AHSG

0.867

ENSMNEP00000025829

0.810

FABP7

0.804

FABP4

0.793

PPARA

0.768

HRG

0.766

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHSG	APOB	ENSMNEP00000001403	ENSMNEP00000037476	Alpha 2-HS glycoprotein.	Apolipoprotein B.	0.882
AHSG	APOC3	ENSMNEP00000001403	ENSMNEP00000044452	Alpha 2-HS glycoprotein.	Apolipoprotein C3.	0.891
AHSG	APOH	ENSMNEP00000001403	ENSMNEP00000019008	Alpha 2-HS glycoprotein.	Apolipoprotein H.	0.900
AHSG	ENSMNEP00000025829	ENSMNEP00000001403	ENSMNEP00000025829	Alpha 2-HS glycoprotein.	Vitellogenin domain-containing protein.	0.796
AHSG	FABP1	ENSMNEP00000001403	ENSMNEP00000008324	Alpha 2-HS glycoprotein.	Fatty acid binding protein 1.	0.867
AHSG	HRG	ENSMNEP00000001403	ENSMNEP00000028168	Alpha 2-HS glycoprotein.	Histidine rich glycoprotein.	0.780
APOB	AHSG	ENSMNEP00000037476	ENSMNEP00000001403	Apolipoprotein B.	Alpha 2-HS glycoprotein.	0.882
APOB	APOC3	ENSMNEP00000037476	ENSMNEP00000044452	Apolipoprotein B.	Apolipoprotein C3.	0.985
APOB	APOH	ENSMNEP00000037476	ENSMNEP00000019008	Apolipoprotein B.	Apolipoprotein H.	0.917
APOB	FABP1	ENSMNEP00000037476	ENSMNEP00000008324	Apolipoprotein B.	Fatty acid binding protein 1.	0.874
APOB	FABP2	ENSMNEP00000037476	ENSMNEP00000026732	Apolipoprotein B.	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.589
APOB	HRG	ENSMNEP00000037476	ENSMNEP00000028168	Apolipoprotein B.	Histidine rich glycoprotein.	0.523
APOC3	AHSG	ENSMNEP00000044452	ENSMNEP00000001403	Apolipoprotein C3.	Alpha 2-HS glycoprotein.	0.891
APOC3	APOB	ENSMNEP00000044452	ENSMNEP00000037476	Apolipoprotein C3.	Apolipoprotein B.	0.985
APOC3	APOH	ENSMNEP00000044452	ENSMNEP00000019008	Apolipoprotein C3.	Apolipoprotein H.	0.922
APOC3	ENSMNEP00000025829	ENSMNEP00000044452	ENSMNEP00000025829	Apolipoprotein C3.	Vitellogenin domain-containing protein.	0.918
APOC3	FABP1	ENSMNEP00000044452	ENSMNEP00000008324	Apolipoprotein C3.	Fatty acid binding protein 1.	0.905
APOC3	HRG	ENSMNEP00000044452	ENSMNEP00000028168	Apolipoprotein C3.	Histidine rich glycoprotein.	0.759
APOH	AHSG	ENSMNEP00000019008	ENSMNEP00000001403	Apolipoprotein H.	Alpha 2-HS glycoprotein.	0.900
APOH	APOB	ENSMNEP00000019008	ENSMNEP00000037476	Apolipoprotein H.	Apolipoprotein B.	0.917