STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS13BVacuolar protein sorting 13 homolog B. (4022 aa)    
Predicted Functional Partners:
H2AJ
Histone H2A; Belongs to the histone H2A family.
      
 0.629
VPS13A
Vacuolar protein sorting 13 homolog A.
   
  
0.596
GAK
Cyclin G associated kinase.
    
 
 0.575
YLPM1
YLP motif containing 1.
      
 0.569
PGAP2
Post-GPI attachment to proteins 2.
   
  
 0.561
AKAP11
A-kinase anchoring protein 11.
   
  
 0.533
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 
 0.513
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
      
 0.502
ZNF462
Zinc finger protein 462.
      
 0.501
FBXW4
F-box and WD repeat domain containing 4.
      
 0.499
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.