STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMPOThymopoietin. (695 aa)    
Predicted Functional Partners:
LMNA
Lamin A/C; Belongs to the intermediate filament family.
   
 0.899
LMNB1
Lamin B1; Belongs to the intermediate filament family.
   
 0.731
BANF2
Barrier to autointegration factor 2.
    
 0.695
LMNB2
Lamin B2; Belongs to the intermediate filament family.
   
 0.619
MPP4
Membrane palmitoylated protein 4; Belongs to the MAGUK family.
    
 0.615
SEC31B
SEC31 homolog B, COPII coat complex component.
    
 0.599
EMD
Emerin.
     
 0.595
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
      
 0.569
VRK3
VRK serine/threonine kinase 3.
    
 
 0.562
RANBP3
RAN binding protein 3.
   
  
 0.516
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.