STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS7ADAM metallopeptidase with thrombospondin type 1 motif 7. (1691 aa)    
Predicted Functional Partners:
COMP
Cartilage oligomeric matrix protein.
    
 0.591
B3GLCT
Beta 3-glucosyltransferase.
    
 0.578
COL3A1
Collagen type III alpha 1 chain.
   
 0.558
SCARF1
Scavenger receptor class F member 1.
   
  
 0.528
NTN5
Netrin 5.
   
  
 0.526
COL4A2
Collagen type IV alpha 2 chain.
    
 0.521
INO80D
INO80 complex subunit D.
      
 0.519
BPIFB1
BPI fold containing family B member 1.
      
 0.519
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
      
 0.515
TMEM216
Transmembrane protein 216.
      
 0.514
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.