STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN11Calpain 11; Belongs to the peptidase C2 family. (738 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
0.793
CAST
Calpastatin.
   
 0.784
ITSN2
Intersectin 2.
   
 
  0.589
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.574
SPATS1
Spermatogenesis associated serine rich 1.
      
 0.480
PDCD6
Programmed cell death 6.
   
0.408
PEF1
Penta-EF-hand domain containing 1.
   
0.408
SRI
Sorcin.
   
0.404
GCA
Grancalcin.
   
0.404
ENSMNEP00000034665
Uncharacterized protein.
   
 0.404
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.