STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU6F1POU domain protein. (611 aa)    
Predicted Functional Partners:
POU2AF1
POU class 2 homeobox associating factor 1.
    
 
 0.672
ELP6
Elongator acetyltransferase complex subunit 6.
      
 0.575
ASCL2
Achaete-scute family bHLH transcription factor 2.
      
 0.504
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
     
 0.491
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
  0.477
GTF2B
General transcription factor IIB.
    
 0.455
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
   
 
  0.444
POLR2F
RNA polymerase II subunit F.
     
 0.418
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.