STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLK3CDC like kinase 3. (638 aa)    
Predicted Functional Partners:
SRSF8
Serine and arginine rich splicing factor 8.
    
 
 0.658
RSRP1
Arginine and serine rich protein 1.
   
   0.635
TRA2A
Transformer 2 alpha homolog.
   
 
 0.622
TRA2B
Transformer 2 beta homolog.
   
 
 0.615
SRSF4
Serine and arginine rich splicing factor 4.
   
 
 0.613
SRSF10
Serine and arginine rich splicing factor 10.
   
 
 0.613
ENSMNEP00000041196
Protein kinase domain-containing protein.
  
 
  
0.604
CLK2
CDC like kinase 2.
  
 
  
0.603
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
    0.569
YTHDC1
YTH domain containing 1.
   
 
 0.564
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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