STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMX1ALIM homeobox transcription factor 1 alpha. (382 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.720
FOXA2
Forkhead box A2.
    
 
 0.698
FGF20
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.683
OTX2
Orthodenticle homeobox 2.
    
 
 0.676
LDB2
LIM domain binding 2.
    
 0.655
ASCL1
Achaete-scute family bHLH transcription factor 1.
    
 0.616
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 
 0.608
MSX1
Msh homeobox 1.
    
 
 0.593
CORIN
Corin, serine peptidase.
    
 
 0.579
MYT1L
Myelin transcription factor 1 like.
      
 0.562
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.