STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM135BFamily with sequence similarity 135 member B. (1407 aa)    
Predicted Functional Partners:
FAM177B
Family with sequence similarity 177 member B.
      
 0.489
RUSC2
RUN and SH3 domain containing 2.
      
 0.487
DEPDC7
DEP domain containing 7.
      
 0.481
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
      
 0.481
VPS35L
VPS35 endosomal protein sorting factor like.
   
  
 0.480
RUSC1
RUN and SH3 domain containing 1.
      
 0.479
TTC22
Tetratricopeptide repeat domain 22.
      
 0.478
CALHM3
Calcium homeostasis modulator 3.
      
 0.400
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.