Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTCH1 | PTCH2 | ENSMNEP00000031242 | ENSMNEP00000011163 | Patched 1. | Patched 2. | 0.995 |
PTCH1 | SMURF1 | ENSMNEP00000031242 | ENSMNEP00000012475 | Patched 1. | SMAD specific E3 ubiquitin protein ligase 1. | 0.996 |
PTCH1 | SMURF2 | ENSMNEP00000031242 | ENSMNEP00000020918 | Patched 1. | E3 ubiquitin-protein ligase. | 0.916 |
PTCH2 | PTCH1 | ENSMNEP00000011163 | ENSMNEP00000031242 | Patched 2. | Patched 1. | 0.995 |
PTCH2 | SMURF1 | ENSMNEP00000011163 | ENSMNEP00000012475 | Patched 2. | SMAD specific E3 ubiquitin protein ligase 1. | 0.996 |
PTCH2 | SMURF2 | ENSMNEP00000011163 | ENSMNEP00000020918 | Patched 2. | E3 ubiquitin-protein ligase. | 0.900 |
RHOA | SMURF1 | ENSMNEP00000038431 | ENSMNEP00000012475 | Ras homolog family member A. | SMAD specific E3 ubiquitin protein ligase 1. | 0.907 |
RHOA | SMURF2 | ENSMNEP00000038431 | ENSMNEP00000020918 | Ras homolog family member A. | E3 ubiquitin-protein ligase. | 0.755 |
RHOA | TGFBR1 | ENSMNEP00000038431 | ENSMNEP00000015186 | Ras homolog family member A. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.491 |
RHOA | TGFBR2 | ENSMNEP00000038431 | ENSMNEP00000035900 | Ras homolog family member A. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.933 |
SMAD1 | SMAD5 | ENSMNEP00000006142 | ENSMNEP00000039558 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.955 |
SMAD1 | SMAD6 | ENSMNEP00000006142 | ENSMNEP00000021755 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.975 |
SMAD1 | SMAD7 | ENSMNEP00000006142 | ENSMNEP00000032801 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.933 |
SMAD1 | SMURF1 | ENSMNEP00000006142 | ENSMNEP00000012475 | Mothers against decapentaplegic homolog. | SMAD specific E3 ubiquitin protein ligase 1. | 0.965 |
SMAD1 | SMURF2 | ENSMNEP00000006142 | ENSMNEP00000020918 | Mothers against decapentaplegic homolog. | E3 ubiquitin-protein ligase. | 0.907 |
SMAD1 | TGFBR1 | ENSMNEP00000006142 | ENSMNEP00000015186 | Mothers against decapentaplegic homolog. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.652 |
SMAD1 | TGFBR2 | ENSMNEP00000006142 | ENSMNEP00000035900 | Mothers against decapentaplegic homolog. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.491 |
SMAD5 | SMAD1 | ENSMNEP00000039558 | ENSMNEP00000006142 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.955 |
SMAD5 | SMAD6 | ENSMNEP00000039558 | ENSMNEP00000021755 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.933 |
SMAD5 | SMAD7 | ENSMNEP00000039558 | ENSMNEP00000032801 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.939 |
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