STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMNEP00000013515FAA_hydrolase domain-containing protein. (301 aa)    
Predicted Functional Partners:
HGD
Homogentisate 1,2-dioxygenase.
  
 
 0.892
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
    
  0.670
HMGCL
3-hydroxy-3-methylglutaryl-CoA lyase.
    
  0.670
FAH
Fumarylacetoacetase.
     
 0.634
FH
Fumarate hydratase.
  
 0.594
METAP1D
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.571
ALDH7A1
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.557
LOC105468632
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.557
VARS1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.553
ALDH9A1
Aldehyde dehydrogenase 9 family member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.508
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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