STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMPD2FERM and PDZ domain containing 2. (1396 aa)    
Predicted Functional Partners:
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
 
   
 0.805
REM1
GTP-binding protein; Belongs to the small GTPase superfamily. RGK family.
    
 0.579
SNTA1
Syntrophin alpha 1.
      
 0.554
IFT57
Intraflagellar transport 57.
    
 0.550
IFT80
Intraflagellar transport 80.
    
 0.543
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.538
IFT172
Intraflagellar transport 172.
    
 0.535
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.532
IFT88
Intraflagellar transport 88.
    
 0.518
IFT52
Intraflagellar transport 52.
    
 0.498
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.