STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTTNRotatin. (2232 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2.
   
 
 0.751
CEP192
Centrosomal protein 192.
   
  
 0.730
POC5
POC5 centriolar protein.
      
 0.694
CEP76
Centrosomal protein 76.
      
 0.673
CEP120
Centrosomal protein 120.
     
 0.668
SPATC1
Spermatogenesis and centriole associated 1.
      
 0.662
L3MBTL4
L3MBTL histone methyl-lysine binding protein 4.
   
  
 0.660
CEP126
Centrosomal protein 126.
     
 0.644
SPATA6
Spermatogenesis associated 6.
      
 0.637
POC1B
POC1 centriolar protein B.
      
 0.633
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.