STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SONSON DNA binding protein. (2426 aa)    
Predicted Functional Partners:
RBM39
RNA binding motif protein 39.
   
  0.951
PRRC2C
Proline rich coiled-coil 2C.
   
    0.932
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.847
RBM25
RNA binding motif protein 25.
   
 
 0.832
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.829
RBM23
RNA binding motif protein 23.
   
  0.818
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.812
SF3B1
Splicing factor 3b subunit 1.
   
   0.802
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
  0.801
PRPF4B
Pre-mRNA processing factor 4B.
   
  
0.797
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.