STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPEF2Sperm flagellar 2. (1822 aa)    
Predicted Functional Partners:
EFCAB6
EF-hand calcium binding domain 6.
   
  0.797
DNAI1
Dynein axonemal intermediate chain 1.
   
  
 0.792
CFAP54
Cilia and flagella associated protein 54.
   
 
 0.712
IFT20
Intraflagellar transport 20.
   
 
 0.655
CCDC39
Coiled-coil domain containing 39.
   
 
 0.654
IFT27
Intraflagellar transport 27.
      
 0.627
CFAP70
Cilia and flagella associated protein 70.
   
 0.593
ARMC2
Armadillo repeat containing 2.
   
 
 0.591
CCDC40
Coiled-coil domain containing 40.
    
 0.586
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 0.586
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.