Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DNM3 | GSX1 | ENSMNEP00000041798 | ENSMNEP00000017379 | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | GS homeobox 1. | 0.503 |
DNM3 | OPCML | ENSMNEP00000041798 | ENSMNEP00000000823 | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Opioid binding protein/cell adhesion molecule like. | 0.586 |
GSX1 | DNM3 | ENSMNEP00000017379 | ENSMNEP00000041798 | GS homeobox 1. | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.503 |
GSX1 | LHX6 | ENSMNEP00000017379 | ENSMNEP00000044572 | GS homeobox 1. | LIM homeobox 6. | 0.535 |
GSX1 | LHX8 | ENSMNEP00000017379 | ENSMNEP00000004125 | GS homeobox 1. | LIM homeobox 8. | 0.597 |
GSX1 | OPCML | ENSMNEP00000017379 | ENSMNEP00000000823 | GS homeobox 1. | Opioid binding protein/cell adhesion molecule like. | 0.478 |
GSX1 | PBX1 | ENSMNEP00000017379 | ENSMNEP00000025887 | GS homeobox 1. | PBX homeobox 1. | 0.442 |
GSX1 | PROKR2 | ENSMNEP00000017379 | ENSMNEP00000018917 | GS homeobox 1. | Prokineticin receptor 2; Belongs to the G-protein coupled receptor 1 family. | 0.499 |
GSX1 | SEMA3F | ENSMNEP00000017379 | ENSMNEP00000028292 | GS homeobox 1. | Semaphorin 3F; Belongs to the semaphorin family. | 0.468 |
GSX1 | SP9 | ENSMNEP00000017379 | ENSMNEP00000022144 | GS homeobox 1. | Sp9 transcription factor. | 0.556 |
GSX1 | TBR1 | ENSMNEP00000017379 | ENSMNEP00000009587 | GS homeobox 1. | T-box brain transcription factor 1. | 0.496 |
GSX1 | TSHZ1 | ENSMNEP00000017379 | ENSMNEP00000013712 | GS homeobox 1. | Teashirt zinc finger homeobox 1. | 0.524 |
LHX6 | GSX1 | ENSMNEP00000044572 | ENSMNEP00000017379 | LIM homeobox 6. | GS homeobox 1. | 0.535 |
LHX6 | TBR1 | ENSMNEP00000044572 | ENSMNEP00000009587 | LIM homeobox 6. | T-box brain transcription factor 1. | 0.549 |
LHX8 | GSX1 | ENSMNEP00000004125 | ENSMNEP00000017379 | LIM homeobox 8. | GS homeobox 1. | 0.597 |
LHX8 | PROKR2 | ENSMNEP00000004125 | ENSMNEP00000018917 | LIM homeobox 8. | Prokineticin receptor 2; Belongs to the G-protein coupled receptor 1 family. | 0.612 |
OPCML | DNM3 | ENSMNEP00000000823 | ENSMNEP00000041798 | Opioid binding protein/cell adhesion molecule like. | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.586 |
OPCML | GSX1 | ENSMNEP00000000823 | ENSMNEP00000017379 | Opioid binding protein/cell adhesion molecule like. | GS homeobox 1. | 0.478 |
PBX1 | GSX1 | ENSMNEP00000025887 | ENSMNEP00000017379 | PBX homeobox 1. | GS homeobox 1. | 0.442 |
PROKR2 | GSX1 | ENSMNEP00000018917 | ENSMNEP00000017379 | Prokineticin receptor 2; Belongs to the G-protein coupled receptor 1 family. | GS homeobox 1. | 0.499 |
page 1 of 2