Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A2ML1 | DSC1 | ENSMNEP00000019285 | ENSMNEP00000024557 | Alpha-2-macroglobulin like 1. | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.677 |
A2ML1 | DSG1 | ENSMNEP00000019285 | ENSMNEP00000003193 | Alpha-2-macroglobulin like 1. | Desmoglein 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.622 |
A2ML1 | DSG3 | ENSMNEP00000019285 | ENSMNEP00000037687 | Alpha-2-macroglobulin like 1. | Desmoglein 3; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.818 |
A2ML1 | DSP | ENSMNEP00000019285 | ENSMNEP00000034446 | Alpha-2-macroglobulin like 1. | Desmoplakin. | 0.788 |
A2ML1 | EVPL | ENSMNEP00000019285 | ENSMNEP00000018544 | Alpha-2-macroglobulin like 1. | Envoplakin. | 0.846 |
A2ML1 | PKP3 | ENSMNEP00000019285 | ENSMNEP00000006119 | Alpha-2-macroglobulin like 1. | Plakophilin 3. | 0.660 |
A2ML1 | PPL | ENSMNEP00000019285 | ENSMNEP00000009689 | Alpha-2-macroglobulin like 1. | Periplakin. | 0.842 |
DSC1 | A2ML1 | ENSMNEP00000024557 | ENSMNEP00000019285 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Alpha-2-macroglobulin like 1. | 0.677 |
DSC1 | DSG1 | ENSMNEP00000024557 | ENSMNEP00000003193 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmoglein 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.833 |
DSC1 | DSG3 | ENSMNEP00000024557 | ENSMNEP00000037687 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmoglein 3; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.794 |
DSC1 | DSP | ENSMNEP00000024557 | ENSMNEP00000034446 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmoplakin. | 0.878 |
DSC1 | EVPL | ENSMNEP00000024557 | ENSMNEP00000018544 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Envoplakin. | 0.789 |
DSC1 | JUP | ENSMNEP00000024557 | ENSMNEP00000025554 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Junction plakoglobin. | 0.760 |
DSC1 | PKP3 | ENSMNEP00000024557 | ENSMNEP00000006119 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Plakophilin 3. | 0.795 |
DSC1 | PPL | ENSMNEP00000024557 | ENSMNEP00000009689 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Periplakin. | 0.790 |
DSG1 | A2ML1 | ENSMNEP00000003193 | ENSMNEP00000019285 | Desmoglein 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Alpha-2-macroglobulin like 1. | 0.622 |
DSG1 | DSC1 | ENSMNEP00000003193 | ENSMNEP00000024557 | Desmoglein 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.833 |
DSG1 | DSP | ENSMNEP00000003193 | ENSMNEP00000034446 | Desmoglein 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmoplakin. | 0.858 |
DSG1 | EVPL | ENSMNEP00000003193 | ENSMNEP00000018544 | Desmoglein 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Envoplakin. | 0.861 |
DSG1 | JUP | ENSMNEP00000003193 | ENSMNEP00000025554 | Desmoglein 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Junction plakoglobin. | 0.769 |
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