STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHM1Pleckstrin homology and RUN domain containing M1. (1055 aa)    
Predicted Functional Partners:
LOC105476784
Uncharacterized protein.
    
 
 0.845
UVRAG
UV radiation resistance associated.
    
 0.736
VPS39
VPS39 subunit of HOPS complex.
   
 
 0.581
CCZ1
Uncharacterized protein.
      
 0.578
SNAP29
Synaptosome associated protein 29.
      
 0.569
STX7
Syntaxin 7; Belongs to the syntaxin family.
      
 0.556
VAMP8
Vesicle associated membrane protein 8.
      
 0.556
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
      
 0.555
STX17
Syntaxin 17; Belongs to the syntaxin family.
      
 0.555
MPDU1
Mannose-P-dolichol utilization defect 1.
      
 0.555
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.