Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB2 | USP9X | ENSMNEP00000010022 | ENSMNEP00000027390 | Damage specific DNA binding protein 2. | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | 0.750 |
DDX3X | PRKX | ENSMNEP00000015417 | ENSMNEP00000001990 | DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. | Protein kinase X-linked; Belongs to the protein kinase superfamily. | 0.643 |
DDX3X | USP9X | ENSMNEP00000015417 | ENSMNEP00000027390 | DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | 0.742 |
ITSN2 | USP9X | ENSMNEP00000026974 | ENSMNEP00000027390 | Intersectin 2. | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | 0.944 |
ITSN2 | ZFAND4 | ENSMNEP00000026974 | ENSMNEP00000014072 | Intersectin 2. | Zinc finger AN1-type containing 4. | 0.577 |
MCL1 | USP9X | ENSMNEP00000045951 | ENSMNEP00000027390 | MCL1 apoptosis regulator, BCL2 family member. | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | 0.708 |
PEX5 | USP9X | ENSMNEP00000001562 | ENSMNEP00000027390 | Peroxisomal biogenesis factor 5. | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | 0.686 |
PEX5 | ZFAND4 | ENSMNEP00000001562 | ENSMNEP00000014072 | Peroxisomal biogenesis factor 5. | Zinc finger AN1-type containing 4. | 0.949 |
PRKX | DDX3X | ENSMNEP00000001990 | ENSMNEP00000015417 | Protein kinase X-linked; Belongs to the protein kinase superfamily. | DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. | 0.643 |
PRKX | USP9X | ENSMNEP00000001990 | ENSMNEP00000027390 | Protein kinase X-linked; Belongs to the protein kinase superfamily. | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | 0.706 |
SMAD4 | USP9X | ENSMNEP00000013301 | ENSMNEP00000027390 | Mothers against decapentaplegic homolog. | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | 0.919 |
TRIP12 | USP34 | ENSMNEP00000026741 | ENSMNEP00000032339 | Thyroid hormone receptor interactor 12. | Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. | 0.806 |
TRIP12 | USP9X | ENSMNEP00000026741 | ENSMNEP00000027390 | Thyroid hormone receptor interactor 12. | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | 0.852 |
TRIP12 | ZFAND4 | ENSMNEP00000026741 | ENSMNEP00000014072 | Thyroid hormone receptor interactor 12. | Zinc finger AN1-type containing 4. | 0.925 |
USP34 | TRIP12 | ENSMNEP00000032339 | ENSMNEP00000026741 | Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. | Thyroid hormone receptor interactor 12. | 0.806 |
USP34 | USP9X | ENSMNEP00000032339 | ENSMNEP00000027390 | Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | 0.789 |
USP34 | ZFAND4 | ENSMNEP00000032339 | ENSMNEP00000014072 | Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. | Zinc finger AN1-type containing 4. | 0.447 |
USP9X | DDB2 | ENSMNEP00000027390 | ENSMNEP00000010022 | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | Damage specific DNA binding protein 2. | 0.750 |
USP9X | DDX3X | ENSMNEP00000027390 | ENSMNEP00000015417 | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. | 0.742 |
USP9X | ITSN2 | ENSMNEP00000027390 | ENSMNEP00000026974 | Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. | Intersectin 2. | 0.944 |
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