STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAMR1Peptidase domain containing associated with muscle regeneration 1; Belongs to the peptidase S1 family. (737 aa)    
Predicted Functional Partners:
MST1R
Macrophage stimulating 1 receptor.
    
  0.569
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.569
GDPD2
Glycerophosphodiester phosphodiesterase domain containing 2.
      
 0.556
PDZRN4
PDZ domain containing ring finger 4.
      
 0.555
CCBE1
Collagen and calcium binding EGF domains 1.
      
 0.555
CNTN6
Contactin 6.
   
 
 0.523
THSD7B
Thrombospondin type 1 domain containing 7B.
      
 0.504
SYT17
Synaptotagmin 17.
      
 0.504
STX19
Syntaxin 19; Belongs to the syntaxin family.
      
 0.497
CLPTM1L
CLPTM1 like.
      
 0.493
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.