Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGRN | DAG1 | ENSMNEP00000031648 | ENSMNEP00000000450 | Agrin. | Dystroglycan 1. | 0.972 |
AGRN | LRP1 | ENSMNEP00000031648 | ENSMNEP00000017793 | Agrin. | LDL receptor related protein 1. | 0.771 |
AGRN | LRP1B | ENSMNEP00000031648 | ENSMNEP00000043765 | Agrin. | LDL receptor related protein 1B. | 0.771 |
AGRN | LRP2 | ENSMNEP00000031648 | ENSMNEP00000003648 | Agrin. | LDL receptor related protein 2. | 0.913 |
AGRN | LRP4 | ENSMNEP00000031648 | ENSMNEP00000032393 | Agrin. | LDL receptor related protein 4. | 0.958 |
AGRN | LRP5 | ENSMNEP00000031648 | ENSMNEP00000042919 | Agrin. | Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. | 0.804 |
AGRN | LRP6 | ENSMNEP00000031648 | ENSMNEP00000021639 | Agrin. | Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. | 0.810 |
AGRN | MUSK | ENSMNEP00000031648 | ENSMNEP00000045179 | Agrin. | Muscle associated receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.708 |
AGRN | NID1 | ENSMNEP00000031648 | ENSMNEP00000007562 | Agrin. | Nidogen 1. | 0.817 |
AGRN | NID2 | ENSMNEP00000031648 | ENSMNEP00000044467 | Agrin. | Nidogen 2. | 0.738 |
DAG1 | AGRN | ENSMNEP00000000450 | ENSMNEP00000031648 | Dystroglycan 1. | Agrin. | 0.972 |
DAG1 | MUSK | ENSMNEP00000000450 | ENSMNEP00000045179 | Dystroglycan 1. | Muscle associated receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.504 |
LRP1 | AGRN | ENSMNEP00000017793 | ENSMNEP00000031648 | LDL receptor related protein 1. | Agrin. | 0.771 |
LRP1 | LRP2 | ENSMNEP00000017793 | ENSMNEP00000003648 | LDL receptor related protein 1. | LDL receptor related protein 2. | 0.924 |
LRP1B | AGRN | ENSMNEP00000043765 | ENSMNEP00000031648 | LDL receptor related protein 1B. | Agrin. | 0.771 |
LRP1B | LRP2 | ENSMNEP00000043765 | ENSMNEP00000003648 | LDL receptor related protein 1B. | LDL receptor related protein 2. | 0.546 |
LRP2 | AGRN | ENSMNEP00000003648 | ENSMNEP00000031648 | LDL receptor related protein 2. | Agrin. | 0.913 |
LRP2 | LRP1 | ENSMNEP00000003648 | ENSMNEP00000017793 | LDL receptor related protein 2. | LDL receptor related protein 1. | 0.924 |
LRP2 | LRP1B | ENSMNEP00000003648 | ENSMNEP00000043765 | LDL receptor related protein 2. | LDL receptor related protein 1B. | 0.546 |
LRP2 | MUSK | ENSMNEP00000003648 | ENSMNEP00000045179 | LDL receptor related protein 2. | Muscle associated receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.648 |
page 1 of 2