STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU4F1POU domain protein. (380 aa)    
Predicted Functional Partners:
IRX2
Iroquois homeobox 2.
   
  
 0.566
CAPN8
Calpain 8; Belongs to the peptidase C2 family.
      
 0.555
ONECUT1
One cut domain family member.
   
 
 0.510
FOXI3
Forkhead box I3.
      
 0.497
MYCL
MYCL proto-oncogene, bHLH transcription factor.
      
 0.495
NEUROG1
Neurogenin 1.
   
  
 0.491
VSX2
Visual system homeobox 2.
   
  
 0.443
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.