STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105466239Ig-like domain-containing protein; Belongs to the MHC class I family. (390 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.833
TRAC
T cell receptor alpha constant.
    
  0.832
RPA2
Replication protein A2.
   
 0.754
ENSMNEP00000024470
RPA_C domain-containing protein.
   
 0.754
THADA
THADA armadillo repeat containing.
    
   0.653
ENSMNEP00000028604
IGv domain-containing protein.
    
  0.647
TRBV27
T cell receptor beta variable 27.
    
  0.647
CD8A
CD8a molecule.
   
 0.621
CD8B
Ig-like domain-containing protein.
   
 
  0.494
ENSMNEP00000000821
Ig-like domain-containing protein.
  
 
  0.424
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.