STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD5Chromodomain helicase DNA binding protein 5. (1968 aa)    
Predicted Functional Partners:
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.888
MBD2
Methyl-CpG binding domain protein 2.
    
 0.788
MBD3
Methyl-CpG binding domain protein 3.
    
 0.788
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.786
ENSMNEP00000035342
GATA-type domain-containing protein.
   
 0.760
GATAD2A
GATA-type domain-containing protein.
   
 0.760
MTA2
Metastasis associated 1 family member 2.
   
 0.757
ZNF219
Zinc finger protein 219.
   
  0.747
ARID4B
AT-rich interaction domain 4B.
    
 0.736
ARID4A
AT-rich interaction domain 4A.
    
 0.736
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.