Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DLK1 | SFMBT2 | ENSMNEP00000034171 | ENSMNEP00000036658 | Delta like non-canonical Notch ligand 1. | Scm like with four mbt domains 2. | 0.524 |
H1-8 | JADE1 | ENSMNEP00000045214 | ENSMNEP00000029393 | H1 histone family member O oocyte specific. | Jade family PHD finger 1. | 0.463 |
H1-8 | KDM4B | ENSMNEP00000045214 | ENSMNEP00000036764 | H1 histone family member O oocyte specific. | Lysine demethylase 4B. | 0.557 |
H1-8 | SFMBT2 | ENSMNEP00000045214 | ENSMNEP00000036658 | H1 histone family member O oocyte specific. | Scm like with four mbt domains 2. | 0.527 |
H1-8 | SLC38A4 | ENSMNEP00000045214 | ENSMNEP00000029970 | H1 histone family member O oocyte specific. | Solute carrier family 38 member 4. | 0.558 |
JADE1 | H1-8 | ENSMNEP00000029393 | ENSMNEP00000045214 | Jade family PHD finger 1. | H1 histone family member O oocyte specific. | 0.463 |
JADE1 | KDM6B | ENSMNEP00000029393 | ENSMNEP00000035188 | Jade family PHD finger 1. | Lysine demethylase 6B. | 0.518 |
JADE1 | SFMBT2 | ENSMNEP00000029393 | ENSMNEP00000036658 | Jade family PHD finger 1. | Scm like with four mbt domains 2. | 0.694 |
JADE1 | SLC38A4 | ENSMNEP00000029393 | ENSMNEP00000029970 | Jade family PHD finger 1. | Solute carrier family 38 member 4. | 0.556 |
JADE1 | SMOC1 | ENSMNEP00000029393 | ENSMNEP00000006671 | Jade family PHD finger 1. | SPARC related modular calcium binding 1. | 0.695 |
JADE1 | SUV39H2 | ENSMNEP00000029393 | ENSMNEP00000007593 | Jade family PHD finger 1. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.519 |
KDM4B | H1-8 | ENSMNEP00000036764 | ENSMNEP00000045214 | Lysine demethylase 4B. | H1 histone family member O oocyte specific. | 0.557 |
KDM4B | KDM6B | ENSMNEP00000036764 | ENSMNEP00000035188 | Lysine demethylase 4B. | Lysine demethylase 6B. | 0.582 |
KDM4B | SFMBT2 | ENSMNEP00000036764 | ENSMNEP00000036658 | Lysine demethylase 4B. | Scm like with four mbt domains 2. | 0.524 |
KDM4B | SLC38A4 | ENSMNEP00000036764 | ENSMNEP00000029970 | Lysine demethylase 4B. | Solute carrier family 38 member 4. | 0.465 |
KDM4B | SUV39H2 | ENSMNEP00000036764 | ENSMNEP00000007593 | Lysine demethylase 4B. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.554 |
KDM6B | JADE1 | ENSMNEP00000035188 | ENSMNEP00000029393 | Lysine demethylase 6B. | Jade family PHD finger 1. | 0.518 |
KDM6B | KDM4B | ENSMNEP00000035188 | ENSMNEP00000036764 | Lysine demethylase 6B. | Lysine demethylase 4B. | 0.582 |
KDM6B | SFMBT2 | ENSMNEP00000035188 | ENSMNEP00000036658 | Lysine demethylase 6B. | Scm like with four mbt domains 2. | 0.538 |
KDM6B | SMOC1 | ENSMNEP00000035188 | ENSMNEP00000006671 | Lysine demethylase 6B. | SPARC related modular calcium binding 1. | 0.471 |
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