Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG10 | ATG12 | ENSMNEP00000037928 | ENSMNEP00000018984 | Autophagy related 10. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.977 |
ATG10 | ATG13 | ENSMNEP00000037928 | ENSMNEP00000008352 | Autophagy related 10. | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | 0.744 |
ATG10 | ATG16L1 | ENSMNEP00000037928 | ENSMNEP00000011457 | Autophagy related 10. | Autophagy related 16 like 1. | 0.567 |
ATG10 | ATG3 | ENSMNEP00000037928 | ENSMNEP00000040593 | Autophagy related 10. | Autophagy-related protein 3. | 0.672 |
ATG10 | ATG4A | ENSMNEP00000037928 | ENSMNEP00000032816 | Autophagy related 10. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.563 |
ATG10 | ATG5 | ENSMNEP00000037928 | ENSMNEP00000017832 | Autophagy related 10. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.820 |
ATG10 | ATG7 | ENSMNEP00000037928 | ENSMNEP00000007685 | Autophagy related 10. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] | 0.910 |
ATG10 | IRGM | ENSMNEP00000037928 | ENSMNEP00000023006 | Autophagy related 10. | Immunity related GTPase M. | 0.576 |
ATG10 | LOC105472095 | ENSMNEP00000037928 | ENSMNEP00000042253 | Autophagy related 10. | Coiled-coil_56 domain-containing protein. | 0.578 |
ATG10 | NBR1 | ENSMNEP00000037928 | ENSMNEP00000039939 | Autophagy related 10. | NBR1 autophagy cargo receptor. | 0.575 |
ATG12 | ATG10 | ENSMNEP00000018984 | ENSMNEP00000037928 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy related 10. | 0.977 |
ATG12 | ATG13 | ENSMNEP00000018984 | ENSMNEP00000008352 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | 0.689 |
ATG12 | ATG16L1 | ENSMNEP00000018984 | ENSMNEP00000011457 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy related 16 like 1. | 0.998 |
ATG12 | ATG3 | ENSMNEP00000018984 | ENSMNEP00000040593 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy-related protein 3. | 0.999 |
ATG12 | ATG4A | ENSMNEP00000018984 | ENSMNEP00000032816 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.516 |
ATG12 | ATG5 | ENSMNEP00000018984 | ENSMNEP00000017832 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.999 |
ATG12 | ATG7 | ENSMNEP00000018984 | ENSMNEP00000007685 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] | 0.996 |
ATG12 | NBR1 | ENSMNEP00000018984 | ENSMNEP00000039939 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | NBR1 autophagy cargo receptor. | 0.782 |
ATG13 | ATG10 | ENSMNEP00000008352 | ENSMNEP00000037928 | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | Autophagy related 10. | 0.744 |
ATG13 | ATG12 | ENSMNEP00000008352 | ENSMNEP00000018984 | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.689 |
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