STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRNP48Small nuclear ribonucleoprotein U11/U12 subunit 48. (339 aa)    
Predicted Functional Partners:
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.978
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.954
SNRPD3
Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.
    
 0.948
DHX38
DEAH-box helicase 38.
    
 0.947
SNRPF
Sm domain-containing protein.
    
 0.944
SNRNP25
Small nuclear ribonucleoprotein U11/U12 subunit 25.
     
 0.942
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.938
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.938
SLU7
SLU7 homolog, splicing factor.
    
 0.937
YJU2
YJU2 splicing factor homolog.
   
 0.934
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.