PSMD10 protein (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PSMD10

Proteasome 26S subunit, non-ATPase 10. (226 aa)

Predicted Functional Partners:

PSMC4

0.981

PSMD13

0.981

PSMD12

0.978

PSMD1

0.977

PSMD11

0.977

PSMD6

0.962

PSMD4

0.955

PAAF1

0.953

PSMD14

0.947

UBXN7

0.946

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PAAF1	PSMC4	ENSMNEP00000014434	ENSMNEP00000011548	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.934
PAAF1	PSMD1	ENSMNEP00000014434	ENSMNEP00000004146	Proteasomal ATPase associated factor 1.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.675
PAAF1	PSMD10	ENSMNEP00000014434	ENSMNEP00000041233	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 10.	0.953
PAAF1	PSMD11	ENSMNEP00000014434	ENSMNEP00000016974	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 11.	0.768
PAAF1	PSMD12	ENSMNEP00000014434	ENSMNEP00000016910	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 12.	0.925
PAAF1	PSMD13	ENSMNEP00000014434	ENSMNEP00000034282	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 13.	0.903
PAAF1	PSMD14	ENSMNEP00000014434	ENSMNEP00000028764	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 14.	0.927
PAAF1	PSMD4	ENSMNEP00000014434	ENSMNEP00000039532	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 4.	0.782
PAAF1	PSMD6	ENSMNEP00000014434	ENSMNEP00000007413	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 6.	0.621
PSMC4	PAAF1	ENSMNEP00000011548	ENSMNEP00000014434	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasomal ATPase associated factor 1.	0.934
PSMC4	PSMD1	ENSMNEP00000011548	ENSMNEP00000004146	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.994
PSMC4	PSMD10	ENSMNEP00000011548	ENSMNEP00000041233	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 10.	0.981
PSMC4	PSMD11	ENSMNEP00000011548	ENSMNEP00000016974	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 11.	0.998
PSMC4	PSMD12	ENSMNEP00000011548	ENSMNEP00000016910	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 12.	0.998
PSMC4	PSMD13	ENSMNEP00000011548	ENSMNEP00000034282	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 13.	0.998
PSMC4	PSMD14	ENSMNEP00000011548	ENSMNEP00000028764	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 14.	0.998
PSMC4	PSMD4	ENSMNEP00000011548	ENSMNEP00000039532	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 4.	0.998
PSMC4	PSMD6	ENSMNEP00000011548	ENSMNEP00000007413	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 6.	0.997
PSMC4	UBXN7	ENSMNEP00000011548	ENSMNEP00000012940	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	UBX domain-containing protein 7.	0.946
PSMD1	PAAF1	ENSMNEP00000004146	ENSMNEP00000014434	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	Proteasomal ATPase associated factor 1.	0.675