Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL1 | DLX2 | ENSMNEP00000028815 | ENSMNEP00000037947 | Achaete-scute family bHLH transcription factor 1. | Distal-less homeobox 2. | 0.762 |
ASCL1 | LMX1A | ENSMNEP00000028815 | ENSMNEP00000011029 | Achaete-scute family bHLH transcription factor 1. | LIM homeobox transcription factor 1 alpha. | 0.616 |
ASCL1 | MYT1L | ENSMNEP00000028815 | ENSMNEP00000045862 | Achaete-scute family bHLH transcription factor 1. | Myelin transcription factor 1 like. | 0.684 |
ASCL1 | NEUROD1 | ENSMNEP00000028815 | ENSMNEP00000000567 | Achaete-scute family bHLH transcription factor 1. | Neurogenic differentiation factor. | 0.427 |
DLX2 | ASCL1 | ENSMNEP00000037947 | ENSMNEP00000028815 | Distal-less homeobox 2. | Achaete-scute family bHLH transcription factor 1. | 0.762 |
DLX2 | MYT1L | ENSMNEP00000037947 | ENSMNEP00000045862 | Distal-less homeobox 2. | Myelin transcription factor 1 like. | 0.584 |
DLX2 | NEUROD1 | ENSMNEP00000037947 | ENSMNEP00000000567 | Distal-less homeobox 2. | Neurogenic differentiation factor. | 0.536 |
HERC2 | MYT1L | ENSMNEP00000025537 | ENSMNEP00000045862 | HECT and RLD domain containing E3 ubiquitin protein ligase 2. | Myelin transcription factor 1 like. | 0.600 |
LMX1A | ASCL1 | ENSMNEP00000011029 | ENSMNEP00000028815 | LIM homeobox transcription factor 1 alpha. | Achaete-scute family bHLH transcription factor 1. | 0.616 |
LMX1A | MYT1L | ENSMNEP00000011029 | ENSMNEP00000045862 | LIM homeobox transcription factor 1 alpha. | Myelin transcription factor 1 like. | 0.562 |
LMX1A | NEUROD1 | ENSMNEP00000011029 | ENSMNEP00000000567 | LIM homeobox transcription factor 1 alpha. | Neurogenic differentiation factor. | 0.495 |
MYT1L | ASCL1 | ENSMNEP00000045862 | ENSMNEP00000028815 | Myelin transcription factor 1 like. | Achaete-scute family bHLH transcription factor 1. | 0.684 |
MYT1L | DLX2 | ENSMNEP00000045862 | ENSMNEP00000037947 | Myelin transcription factor 1 like. | Distal-less homeobox 2. | 0.584 |
MYT1L | HERC2 | ENSMNEP00000045862 | ENSMNEP00000025537 | Myelin transcription factor 1 like. | HECT and RLD domain containing E3 ubiquitin protein ligase 2. | 0.600 |
MYT1L | LMX1A | ENSMNEP00000045862 | ENSMNEP00000011029 | Myelin transcription factor 1 like. | LIM homeobox transcription factor 1 alpha. | 0.562 |
MYT1L | NEUROD1 | ENSMNEP00000045862 | ENSMNEP00000000567 | Myelin transcription factor 1 like. | Neurogenic differentiation factor. | 0.594 |
MYT1L | NOTCH1 | ENSMNEP00000045862 | ENSMNEP00000012653 | Myelin transcription factor 1 like. | Notch receptor 1. | 0.561 |
MYT1L | NOTCH2 | ENSMNEP00000045862 | ENSMNEP00000008317 | Myelin transcription factor 1 like. | Notch receptor 2. | 0.576 |
MYT1L | PXDN | ENSMNEP00000045862 | ENSMNEP00000015259 | Myelin transcription factor 1 like. | Peroxidasin. | 0.644 |
MYT1L | SNTG2 | ENSMNEP00000045862 | ENSMNEP00000007288 | Myelin transcription factor 1 like. | Syntrophin gamma 2. | 0.804 |
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