STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_1121Glutamine amidotransferases class-II family protein. (1567 aa)    
Predicted Functional Partners:
gltD
Glutamate synthase, NADH/NADPH, small subunit domain protein.
 0.999
DM40_1366
glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.999
DM40_1393
Hypothetical protein; Conserved region in glutamate synthase family protein; Belongs to the glutamate synthase family.
 
0.999
fadH
NADH:flavin oxidoreductase / NADH oxidase family protein.
  
 0.999
DM40_5428
FAD binding domain protein.
 0.999
glnA
glnA: glutamine synthetase, type I.
  
 
 0.987
DM40_2809
Glutamine synthetase, catalytic domain protein.
  
 
 0.987
DM40_590
Glutamine synthetase, catalytic domain protein.
  
 
 0.987
carB
CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit.
  
 
 0.984
DM40_3053
soxA: sarcosine oxidase, alpha subunit; Belongs to the GcvT family.
    
 0.979
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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