STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM40_1480glutaryl-CoA dehydrogenase. (395 aa)    
Predicted Functional Partners:
DM40_1247
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.971
DM40_336
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.955
DM40_2504
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.947
lpdA-3
lipoamide_DH: dihydrolipoyl dehydrogenase.
  
 0.939
DM40_337
enoyl-CoA hydratase/isomerase family protein.
 
 0.934
DM40_2033
coA-transferase III family protein; Belongs to the CoA-transferase III family.
 
 
  0.928
DM40_5529
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
  
 
0.914
sucB
Dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
   
  0.913
DM40_3495
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
  
 
0.913
DM40_5523
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
  
 
0.913
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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