STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_1509Hypothetical protein. (244 aa)    
Predicted Functional Partners:
DM40_2667
arsC_related: transcriptional regulator, Spx/MgsR family protein; Belongs to the ArsC family.
    
 
 0.678
arsC
arsC: arsenate reductase.
    
 
 0.678
DM40_2446
Bacterial-like globin family protein.
  
  
 0.556
yjbI
Bacterial-like globin family protein.
  
  
 0.556
DM40_3405
NADPH-dependent FMN reductase family protein.
 
    0.550
DM40_620
Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.538
flgC
flgC: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.538
DM40_1508
efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 family protein; Belongs to the major facilitator superfamily.
   
   0.523
msuE
FMN_reduc_MsuE: FMN reductase.
 
    0.510
DM40_3699
NADPH-dependent FMN reductase family protein.
 
    0.501
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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