STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdcCMalonate_delta: malonate decarboxylase acyl carrier protein. (104 aa)    
Predicted Functional Partners:
mdcB
triphosphoribosyl-dephospho-CoA synthase MdcB; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
  
 0.995
mdcA
mdcA: malonate decarboxylase, alpha subunit.
 
  
 0.980
mdcD
Malonate_beta: malonate decarboxylase, beta subunit.
 
  
 0.973
mdcH
malonate_mdcH: malonate decarboxylase, epsilon subunit.
 
  
 0.959
mdcE
Malonate_gamma: malonate decarboxylase, gamma subunit.
 
     0.952
mdcG
malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase.
 
     0.952
madL
malonate_madL: malonate transporter, MadL subunit.
 
    0.914
DM40_5531
hpcH/HpaI aldolase/citrate lyase family protein.
 
 
 0.891
DM40_3938
hpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.876
DM40_5518
hpcH/HpaI aldolase/citrate lyase family protein.
  
 
 0.876
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.