STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sixAsixA: phosphohistidine phosphatase SixA. (152 aa)    
Predicted Functional Partners:
DM40_1969
Acetyltransferase domain protein.
       0.586
DM40_664
Flagellar hook-length control FliK family protein.
  
     0.500
flhF
flhF: flagellar biosynthesis protein FlhF.
 
     0.465
DM40_3534
Thioredoxin family protein.
  
     0.455
ppk1
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
     0.430
DM40_1307
MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein.
  
     0.429
gshA
gshA_ferroox: glutamate--cysteine ligase.
 
     0.417
DM40_1121
Glutamine amidotransferases class-II family protein.
       0.412
DM40_2729
FKBP-type peptidyl-prolyl cis-trans isomerase family protein.
 
     0.404
DM40_1301
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
      
 0.403
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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