| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM40_197 | DM40_198 | DM40_197 | DM40_198 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | N-acetylmuramoyl-L-alanine amidase family protein. | 0.898 |
| DM40_197 | miaA | DM40_197 | DM40_1453 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.646 |
| DM40_197 | nnrE | DM40_197 | DM40_2516 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | Hydroxyethylthiazole kinase family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow [...] | 0.828 |
| DM40_197 | polA | DM40_197 | DM40_3881 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.588 |
| DM40_197 | queG | DM40_197 | DM40_196 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. | 0.789 |
| DM40_197 | recG | DM40_197 | DM40_1415 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.627 |
| DM40_197 | thiL | DM40_197 | DM40_1334 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.561 |
| DM40_197 | tsaD | DM40_197 | DM40_3890 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | tRNA threonylcarbamoyl adenosine modification protein YgjD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.936 |
| DM40_197 | xerD | DM40_197 | DM40_194 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.563 |
| DM40_197 | yeaZ | DM40_197 | DM40_2681 | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.985 |
| DM40_198 | DM40_197 | DM40_198 | DM40_197 | N-acetylmuramoyl-L-alanine amidase family protein. | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | 0.898 |
| DM40_198 | miaA | DM40_198 | DM40_1453 | N-acetylmuramoyl-L-alanine amidase family protein. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.492 |
| DM40_198 | nnrE | DM40_198 | DM40_2516 | N-acetylmuramoyl-L-alanine amidase family protein. | Hydroxyethylthiazole kinase family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow [...] | 0.644 |
| DM40_198 | queG | DM40_198 | DM40_196 | N-acetylmuramoyl-L-alanine amidase family protein. | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. | 0.688 |
| DM40_198 | xerD | DM40_198 | DM40_194 | N-acetylmuramoyl-L-alanine amidase family protein. | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.517 |
| miaA | DM40_197 | DM40_1453 | DM40_197 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE. | 0.646 |
| miaA | DM40_198 | DM40_1453 | DM40_198 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | N-acetylmuramoyl-L-alanine amidase family protein. | 0.492 |
| miaA | nnrE | DM40_1453 | DM40_2516 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Hydroxyethylthiazole kinase family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow [...] | 0.685 |
| miaA | polA | DM40_1453 | DM40_3881 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.595 |
| miaA | recG | DM40_1453 | DM40_1415 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.488 |