Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DM40_2179Bacterial regulatory s, gntR family protein. (238 aa)    
Predicted Functional Partners:
DM40_3295
Bacterial transcriptional regulator family protein.
  
    0.636
DM40_4352
Bacterial regulatory s, gntR family protein.
  
     0.605
DM40_2180
Oxidoreductase, NAD-binding Rossmann fold family protein.
       0.523
DM40_1322
2-keto-3-deoxy-galactonokinase family protein.
 
  
 0.480
DM40_3372
Bacterial regulatory s, gntR family protein.
  
  
 0.449
rpiA
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.419
DM40_5311
Fumarylacetoacetate (FAA) hydrolase family protein.
  
     0.407
DM40_3681
Bacterial transcriptional regulator family protein.
  
    0.401
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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