STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_227agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit. (452 aa)    
Predicted Functional Partners:
DM40_228
Hypothetical protein.
 
     0.927
DM40_4407
Putative phosphofructokinase pfkB.
     
 0.908
DM40_1323
Thiamine monophosphate synthase/TENI family protein.
     
  0.900
eda
Eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein.
     
  0.800
DM40_3596
Aldehyde dehydrogenase family protein.
     
  0.800
polS
Sorbitol dehydrogenase.
       0.728
fba
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
  
 
 0.664
DM40_226
Bacterial extracellular solute-binding family protein.
       0.548
fbp
Fructose-1-6-bisphosphatase family protein; Belongs to the FBPase class 1 family.
     
  0.500
pgi
Phosphoglucose isomerase family protein; Belongs to the GPI family.
     
  0.500
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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