Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM40_2314glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein. (127 aa)    
Predicted Functional Partners:
DM40_2313
HMGL-like family protein.
     
 0.782
DM40_2312
coA-transferase III family protein; Belongs to the CoA-transferase III family.
  
    0.739
DM40_5516
mmgE/PrpD family protein.
 
  
 0.701
DM40_5517
mmgE/PrpD family protein.
 
  
 0.683
DM40_5560
mmgE/PrpD family protein.
 
  
 0.682
DM40_5511
mmgE/PrpD family protein.
 
  
 0.662
DM40_3938
hpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.606
DM40_5518
hpcH/HpaI aldolase/citrate lyase family protein.
  
  
 0.606
DM40_5531
hpcH/HpaI aldolase/citrate lyase family protein.
  
  
 0.606
nuoI
NADH-quinone oxidoreductase, chain I family protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
    0.436
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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