Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM40_1274 | DM40_1790 | DM40_1274 | DM40_1790 | Hypothetical protein. | Hypothetical protein; Anti sigma-E RseA, N-terminal domain protein. | 0.569 |
DM40_1274 | DM40_2401 | DM40_1274 | DM40_2401 | Hypothetical protein. | Hypothetical protein. | 0.538 |
DM40_1790 | DM40_1274 | DM40_1790 | DM40_1274 | Hypothetical protein; Anti sigma-E RseA, N-terminal domain protein. | Hypothetical protein. | 0.569 |
DM40_1790 | DM40_2401 | DM40_1790 | DM40_2401 | Hypothetical protein; Anti sigma-E RseA, N-terminal domain protein. | Hypothetical protein. | 0.586 |
DM40_2401 | DM40_1274 | DM40_2401 | DM40_1274 | Hypothetical protein. | Hypothetical protein. | 0.538 |
DM40_2401 | DM40_1790 | DM40_2401 | DM40_1790 | Hypothetical protein. | Hypothetical protein; Anti sigma-E RseA, N-terminal domain protein. | 0.586 |
DM40_2401 | DM40_4637 | DM40_2401 | DM40_4637 | Hypothetical protein. | Part of AAA domain protein. | 0.707 |
DM40_2401 | DM40_5758 | DM40_2401 | DM40_5758 | Hypothetical protein. | Nuclease-related domain protein. | 0.692 |
DM40_2401 | DM40_625 | DM40_2401 | DM40_625 | Hypothetical protein. | flgN family protein. | 0.578 |
DM40_2401 | hflC | DM40_2401 | DM40_2402 | Hypothetical protein. | HflC protein; HflC and HflK could regulate a protease. | 0.704 |
DM40_2401 | hflK | DM40_2401 | DM40_2403 | Hypothetical protein. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.681 |
DM40_2401 | hflX | DM40_2401 | DM40_2404 | Hypothetical protein. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.561 |
DM40_2401 | hisZ | DM40_2401 | DM40_2400 | Hypothetical protein. | ATP phosphoribosyltransferase, regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine. | 0.593 |
DM40_2401 | nnrE | DM40_2401 | DM40_2516 | Hypothetical protein. | Hydroxyethylthiazole kinase family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow [...] | 0.546 |
DM40_4637 | DM40_2401 | DM40_4637 | DM40_2401 | Part of AAA domain protein. | Hypothetical protein. | 0.707 |
DM40_5758 | DM40_2401 | DM40_5758 | DM40_2401 | Nuclease-related domain protein. | Hypothetical protein. | 0.692 |
DM40_625 | DM40_2401 | DM40_625 | DM40_2401 | flgN family protein. | Hypothetical protein. | 0.578 |
hflC | DM40_2401 | DM40_2402 | DM40_2401 | HflC protein; HflC and HflK could regulate a protease. | Hypothetical protein. | 0.704 |
hflC | hflK | DM40_2402 | DM40_2403 | HflC protein; HflC and HflK could regulate a protease. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.999 |
hflC | hflX | DM40_2402 | DM40_2404 | HflC protein; HflC and HflK could regulate a protease. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.825 |
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